Gene expression profiling

Ido serves as a marker of poor prognosis in gene expression profiles of serous ovarian cancer cells

Experimental Design / Ovarian Cancer / Gene expression / Cell line / Real Time / Enzyme / Chip / Kaplan-Meier / Combination drug therapy / Permutation Test / Genomes / Overall Survival / Gene expression profiling / Enzyme / Chip / Kaplan-Meier / Combination drug therapy / Permutation Test / Genomes / Overall Survival / Gene expression profiling

RNAbrowse: RNA-Seq De Novo Assembly Results Browser

Computational Biology / Multidisciplinary / Software / Humans / PLoS one / Computer User Interface Design / Internet / Gene expression profiling / Computer User Interface Design / Internet / Gene expression profiling

Transcriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey

Network Analysis / Gene expression / Signal Transduction / Biological Sciences / Botrytis / Expressed Sequence Tags / Stress response / Light / Nitrogen / Lipid metabolism / Trichoderma / Rhizoctonia / Botrytis cinerea / Amino Acid Profile / Plant Pathogen / Expression analysis / Gene expression profiling / Rhizoctonia solani / Expressed Sequence Tags / Stress response / Light / Nitrogen / Lipid metabolism / Trichoderma / Rhizoctonia / Botrytis cinerea / Amino Acid Profile / Plant Pathogen / Expression analysis / Gene expression profiling / Rhizoctonia solani

Visualizing Chromosomes as Transcriptome Correlation Maps: Evidence of Chromosomal Domains Containing Co-expressed Genes--A Study of 130 Invasive Ductal Breast Carcinomas

Genetics / Data Analysis / Gene regulation / Cancer / Breast Cancer / Gene expression / Higher Order Thinking / Humans / Hierarchical Clustering / Human Genome / Breast carcinoma / Tumor Progression / Gene expression profiling / Gene expression / Higher Order Thinking / Humans / Hierarchical Clustering / Human Genome / Breast carcinoma / Tumor Progression / Gene expression profiling

The novel ER membrane protein PRO41 is essential for sexual development in the filamentous fungus Sordaria macrospora

Fluorescence Microscopy / Membrane Proteins / Molecular Microbiology / Confocal Microscopy / Western blotting / Biological Sciences / Mutation / Endoplasmic Reticulum / Cell Fractionation / Sexual Development / Amino Acid Sequence / Membrane Protein / Gene expression profiling / Biological Sciences / Mutation / Endoplasmic Reticulum / Cell Fractionation / Sexual Development / Amino Acid Sequence / Membrane Protein / Gene expression profiling

Symbolic Data Analysis to Defy Low Signal-to-Noise Ratio in Microarray Data for Breast Cancer Prognosis

Algorithms / Data Mining / Computational Biology / Biological Sciences / Humans / Mathematical Sciences / Female / Middle Aged / Survival Rate / Prognosis / Signal to Noise Ratio / Gene expression profiling / Mathematical Sciences / Female / Middle Aged / Survival Rate / Prognosis / Signal to Noise Ratio / Gene expression profiling

Experimental design and environmental parameters affect Rhodospirillum rubrum S1H response to space flight

Technology / Radiobiology of Ionizing Radiation / Experimental Design / Biological Sciences / Environmental Sciences / Space flight / Low Dose / Cell Viability / Environmental Conditions / Very high throughput / International space station / Physiological Stress Markers / Organic Waste / Ionizing Radiation / Proteome / Support System / Environmental Parameter / Rhodospirillum-rubrum / Gene expression profiling / Differential expression / Space flight / Low Dose / Cell Viability / Environmental Conditions / Very high throughput / International space station / Physiological Stress Markers / Organic Waste / Ionizing Radiation / Proteome / Support System / Environmental Parameter / Rhodospirillum-rubrum / Gene expression profiling / Differential expression

Transcriptome Analysis

Genetic Engineering / Transcriptome / Humans / Animals / Biotechnology and Biochemical Engineering / Microarray Analysis / Recombinant Proteins / Gene expression profiling / Microarray Analysis / Recombinant Proteins / Gene expression profiling

Melanoma NOS1 expression promotes dysfunctional IFN signaling

Signal Transduction / Humans / Female / Melanoma / Male / Clinical Investigation / Comparative Genomic Hybridization / Gene expression profiling / Adoptive Transfer / Interferon Alpha / Clinical Investigation / Comparative Genomic Hybridization / Gene expression profiling / Adoptive Transfer / Interferon Alpha

The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data

Biological Sciences / Software / Cell line / Environmental Sciences / Single cell analysis / Humans / Sequence alignment / Mutation / Female / Nucleic Acids / Genetic variation / Exome / Gene expression profiling / Humans / Sequence alignment / Mutation / Female / Nucleic Acids / Genetic variation / Exome / Gene expression profiling

Pathogenomics of Listeria spp

Medical Microbiology / Proteomics / Virulence / Phylogeny / Genome evolution / Listeria / Gene expression profiling / Listeria / Gene expression profiling

Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach

Humans / Embryonic Stem Cells / Valproic Acid / Gene Expression Regulation / Gene expression profiling

Molecular Profiling of Parathyroid Hyperplasia, Adenoma and Carcinoma

Humans / Hyperplasia / Fluorescent Antibody Technique / Adenoma / Oncology and Molecular Pathology / Adenocarcinoma / Gene expression profiling / Adenocarcinoma / Gene expression profiling

Urokinase system expression in gastric carcinoma

Cancer / Biopsy / Humans / Female / Male / Risk factors / Phenotype / Aged / Intestines / Middle Aged / Carcinoma / Neoplasm Invasiveness / Adult / Prognosis / Risk Factors / Predictive value of tests / Gastric Carcinoma / Plasminogen Activator Inhibitor / Gene expression profiling / Risk factors / Phenotype / Aged / Intestines / Middle Aged / Carcinoma / Neoplasm Invasiveness / Adult / Prognosis / Risk Factors / Predictive value of tests / Gastric Carcinoma / Plasminogen Activator Inhibitor / Gene expression profiling

DNA double-strand breaks activate a multi-functional genetic program in developing lymphocytes

Enzyme Inhibitors / DNA damage / Multidisciplinary / Nature / Cell line / Mice / Animals / NF-kappa B / B Lymphocytes / Cell Cycle Proteins / Cell Survival / DNA binding proteins / Gene expression profiling / Mice / Animals / NF-kappa B / B Lymphocytes / Cell Cycle Proteins / Cell Survival / DNA binding proteins / Gene expression profiling

Macrophage Responses to Silica Nanoparticles are Highly Conserved Across Particle Sizes

Particle Physics / Gene regulation / Electrochemistry / Nanoparticles / Macrophages / Gene expression / Cell line / Mice / Protein Secretion / Silica / Animals / Light / Suspensions / Mode of action / Microarray Analysis / Surface Area / Particle Size / Biological Process / Gene Set Enrichment Analysis / Biological activity / Health Effect / Silicon Dioxide / Physical Properties / Enzyme Linked Immunosorbent Assay / Gene expression profiling / Gene expression / Cell line / Mice / Protein Secretion / Silica / Animals / Light / Suspensions / Mode of action / Microarray Analysis / Surface Area / Particle Size / Biological Process / Gene Set Enrichment Analysis / Biological activity / Health Effect / Silicon Dioxide / Physical Properties / Enzyme Linked Immunosorbent Assay / Gene expression profiling

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