Protein Sequence Analysis - Page 2

MEROPS: the peptidase database

Biological Sciences / Environmental Sciences / Humans / Sequence alignment / Mice / Animals / Nucleic Acids / Computer User Interface Design / Protein Sequence Analysis / Active site / Protease Inhibitors / Internet / Hierarchical Classification / Animals / Nucleic Acids / Computer User Interface Design / Protein Sequence Analysis / Active site / Protease Inhibitors / Internet / Hierarchical Classification

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PeroxiBase: The peroxidase database

Phytochemistry / Biological Sciences / Phylogeny / Peroxidase / Plants / CHEMICAL SCIENCES / Protein Sequence Analysis / Peroxidases / CHEMICAL SCIENCES / Protein Sequence Analysis / Peroxidases

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ProServer: a simple, extensible Perl DAS server

Bioinformatics / Programming Languages / Computational Biology / Biological Sciences / Software / Humans / Mathematical Sciences / Structured data / Federated Databases / Protein Sequence Analysis / Data Exchange / Human Genome / Data Model / Computer communication networks / Structure activity Relationship / Internet / Biological Database / Data Type / Humans / Mathematical Sciences / Structured data / Federated Databases / Protein Sequence Analysis / Data Exchange / Human Genome / Data Model / Computer communication networks / Structure activity Relationship / Internet / Biological Database / Data Type

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A novel liver-specific zona pellucida domain containing protein that is expressed rarely in hepatocellular carcinoma

Membrane Proteins / Hepatology / Cell Division / Cell line / Humans / Mice / Animals / Hepatocellular Carcinoma / DNA methylation / Clinical Sciences / Protein Sequence Analysis / Nuclear envelope / Cell nucleus / Hepatocytes / Amino Acid Profile / SIGNAL PEPTIDE / Amino Acid Sequence / Base Sequence / Open Reading Frame / Growth Factor / Zona Pellucida / Subcellular Fractions / Full Length Movies / Embryo Development / Cell Growth / Mice / Animals / Hepatocellular Carcinoma / DNA methylation / Clinical Sciences / Protein Sequence Analysis / Nuclear envelope / Cell nucleus / Hepatocytes / Amino Acid Profile / SIGNAL PEPTIDE / Amino Acid Sequence / Base Sequence / Open Reading Frame / Growth Factor / Zona Pellucida / Subcellular Fractions / Full Length Movies / Embryo Development / Cell Growth

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PeroxiBase: The peroxidase database

Phytochemistry / Biological Sciences / Phylogeny / Peroxidase / Plants / CHEMICAL SCIENCES / Protein Sequence Analysis / Peroxidases / S100 protein family / CHEMICAL SCIENCES / Protein Sequence Analysis / Peroxidases / S100 protein family

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SEQOPTICS: a protein sequence clustering system

Algorithms / Artificial Intelligence / Biological Sciences / Software / Sequence alignment / Mathematical Sciences / Cluster Analysis / BMC Bioinformatics / Protein structure / Proteins / Computer User Interface Design / Protein Sequence Analysis / Clustering Method / Parallel Computer / Amino Acid Sequence / Cluster System / Evaluation Criteria / Mathematical Sciences / Cluster Analysis / BMC Bioinformatics / Protein structure / Proteins / Computer User Interface Design / Protein Sequence Analysis / Clustering Method / Parallel Computer / Amino Acid Sequence / Cluster System / Evaluation Criteria

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Complete nucleotide sequence of a P2 family lysogenic bacteriophage, ϕMhaA1-PHL101, from Mannheimia haemolytica serotype A1

Virology / Bacteriophages / DNA replication / DNA viruses / Biological Sciences / Protein Sequence Analysis / Genome sequence / Base Sequence / Open Reading Frame / Mannheimia Haemolytica / Protein Sequence Analysis / Genome sequence / Base Sequence / Open Reading Frame / Mannheimia Haemolytica

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Genetic programming for creating Chou’s pseudo amino acid based features for submitochondria localization

Computational Biology / Radial Basis Function / Support Vector Machines / Mitochondria / Computer Simulation / Feature Extraction / Proteins / Cross Validation / Support vector machine / Amino Acids / Protein Sequence Analysis / Reproducibility of Results / Amino Acid Profile / Amino Acid Sequence / Amino Acid Substitution Rates / Sensitivity and Specificity / Prediction Accuracy / Feature Extraction / Proteins / Cross Validation / Support vector machine / Amino Acids / Protein Sequence Analysis / Reproducibility of Results / Amino Acid Profile / Amino Acid Sequence / Amino Acid Substitution Rates / Sensitivity and Specificity / Prediction Accuracy

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Enzymatic, expression and structural divergences among carboxyl O-methyltransferases after gene duplication and speciation in Nicotiana

Genetics / Molecular Evolution / Plant Biology / Tobacco / Plant Molecular Biology / Phylogeny / Gene Duplication / Plant Defence / Enzyme / Protein Sequence Analysis / Odors / Benzoic Acid / Gas Chromatography/mass Spectrometry / Enzyme activity / Gene Family / Salicylic Acid / Nicotinic acid / Biochemistry and cell biology / Phylogeny / Gene Duplication / Plant Defence / Enzyme / Protein Sequence Analysis / Odors / Benzoic Acid / Gas Chromatography/mass Spectrometry / Enzyme activity / Gene Family / Salicylic Acid / Nicotinic acid / Biochemistry and cell biology

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PROTOGENE: turning amino acid alignments into bona fide CDS nucleotide alignments

Biological Sciences / DNA / Software / Environmental Sciences / Sequence alignment / Nucleic Acids / Genes / Computer User Interface Design / Protein Sequence Analysis / Amino Acid Profile / Multiple Sequence Alignment / Base Sequence / Internet / Nucleotides / Nucleic Acids / Genes / Computer User Interface Design / Protein Sequence Analysis / Amino Acid Profile / Multiple Sequence Alignment / Base Sequence / Internet / Nucleotides

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Three structurally related, highly potent, peptides from the venom of Parabuthus transvaalicus possess divergent biological activity

South Africa / Nomenclature / Sequence alignment / Mice / Animals / Insects / Peptides / Rat Brain / SCORPIONS / Neurotoxins / High Pressure Liquid Chromatography / South African / Protein Sequence Analysis / Rats / SYNAPTOSOMES / Nervous System / Protein Conformation / Biological activity / Species Specificity / Amino Acid Sequence / Protein Binding / Toxicon / Cumulant / Motor activity / Insects / Peptides / Rat Brain / SCORPIONS / Neurotoxins / High Pressure Liquid Chromatography / South African / Protein Sequence Analysis / Rats / SYNAPTOSOMES / Nervous System / Protein Conformation / Biological activity / Species Specificity / Amino Acid Sequence / Protein Binding / Toxicon / Cumulant / Motor activity

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Collision-Induced Dissociation Fragmentation Inside Disulfide C-Terminal Loops of Natural Non-Tryptic Peptides

Analytical Chemistry / Mass Spectrometry / Animals / Peptides / Skin / Protein Sequence Analysis / Ranidae / Amino Acid Sequence / Amphibian Proteins / Protein Sequence Analysis / Ranidae / Amino Acid Sequence / Amphibian Proteins

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A systematic approach to modeling, capturing, and disseminating proteomics experimental data

Documentation / Modeling / Proteomics / Knowledge Representation / Gene expression / Multidisciplinary / Nature / Hypermedia / Database Management Systems / Software / Software Design / Automation / Unified Modelling Language / Proteins / Computer User Interface Design / Information Storage and Retrieval / Protein Sequence Analysis / Information Dissemination / Very high throughput / Unified Modeling Language / Structured Query Language / Protein Conformation / Proteome / Experimental Data / Extensible Markup Language / Multidisciplinary / Nature / Hypermedia / Database Management Systems / Software / Software Design / Automation / Unified Modelling Language / Proteins / Computer User Interface Design / Information Storage and Retrieval / Protein Sequence Analysis / Information Dissemination / Very high throughput / Unified Modeling Language / Structured Query Language / Protein Conformation / Proteome / Experimental Data / Extensible Markup Language

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?Mass defect? tags for biomolecular mass spectrometry

Mass Spectrometry / Mass / Animals / Proteins / CHEMICAL SCIENCES / Myoglobin / Protein Sequence Analysis / Binding Energy / Differential Display / Protein Binding / Myoglobin / Protein Sequence Analysis / Binding Energy / Differential Display / Protein Binding

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Local Alignment Refinement Using Structural Assessment

Engineering / Algorithms / Physics / Chemistry / Biology / Medicine / Multidisciplinary / Homology Modeling / Humans / Sequence alignment / Animals / Proteins / PLoS one / Protein Sequence Analysis / Local Alignment / Secondary Structure / Three Dimensional / Amino Acid Sequence / Physico chemical Properties / Force Field Analysis / Molecular Sequence Data / Medicine / Multidisciplinary / Homology Modeling / Humans / Sequence alignment / Animals / Proteins / PLoS one / Protein Sequence Analysis / Local Alignment / Secondary Structure / Three Dimensional / Amino Acid Sequence / Physico chemical Properties / Force Field Analysis / Molecular Sequence Data

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A systematic approach to modeling, capturing, and disseminating proteomics experimental data

Documentation / Modeling / Proteomics / Knowledge Representation / Gene expression / Multidisciplinary / Nature / Hypermedia / Database Management Systems / Software / Software Design / Automation / Unified Modelling Language / Proteins / Computer User Interface Design / Information Storage and Retrieval / Protein Sequence Analysis / Information Dissemination / Very high throughput / Unified Modeling Language / Structured Query Language / Protein Conformation / Proteome / Experimental Data / Extensible Markup Language / Multidisciplinary / Nature / Hypermedia / Database Management Systems / Software / Software Design / Automation / Unified Modelling Language / Proteins / Computer User Interface Design / Information Storage and Retrieval / Protein Sequence Analysis / Information Dissemination / Very high throughput / Unified Modeling Language / Structured Query Language / Protein Conformation / Proteome / Experimental Data / Extensible Markup Language

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