System Biology

Development of a Model, Metal-reducing Microbial Community for a System Biology Level Assessment of Desulfovibrio vulgaris as part of a Community

Cell Signaling / System Biology / Gene expression / Methane / Steady state / Methane Oxidation / Microbial community / Methane Oxidation / Microbial community

PRISM: A data management system for high���throughput proteomics

Distributed Computing / Management Information Systems / Data Analysis / Computational Biology / Mass Spectrometry / Proteomics / System Biology / Biological Sciences / Liquid State Machine / Data Collection / High Performance Liquid Chromatography / Management System / Very high throughput / Data Processing / Large Scale / LC MS / Proteome / Database / Data management system / Proteomics / System Biology / Biological Sciences / Liquid State Machine / Data Collection / High Performance Liquid Chromatography / Management System / Very high throughput / Data Processing / Large Scale / LC MS / Proteome / Database / Data management system

A genomic-based approach identifies FXYD domain containing ion transport regulator 2 (FXYD2)γa as a pancreatic beta cell-specific biomarker

Genomics / Immunohistochemistry / System Biology / Functional Genomics / Western blotting / Macaca / Humans / Animals / Clinical Sciences / Public health systems and services research / Biological markers / Streptozotocin / Ion Transport / Membrane Protein / Type 2 Diabetes Mellitus / islets of Langerhans / Microarray Data / Pancreatic islets / Macaca / Humans / Animals / Clinical Sciences / Public health systems and services research / Biological markers / Streptozotocin / Ion Transport / Membrane Protein / Type 2 Diabetes Mellitus / islets of Langerhans / Microarray Data / Pancreatic islets

Complex systems: from chemistry to systems biology

Genetics / Chemistry / Decision Making / Signal Processing / Computational Biology / Behavior / Gene regulation / Kinetics / Systems Biology / Fluorescence / Cell Signaling / System Biology / Stem Cell / Gene expression / Multidisciplinary / Signal Transduction / Chemical Kinetics / Protein-Protein Interaction / Complex System / Computer Simulation / Calibration / Embryonic Stem Cell / Cell Death / Stochastic Simulation / Cell Signalling / Time Delay / Quorum Sensing / Model Reduction / Genome / Phenotype / Gibbs sampling / Numerical Integration / Bayesian model / Bacillus subtilis / Renormalization Group / Biological Process / Exponential distribution / Quantitative Trait Loci / Genetic variation / Differential equation / Eukaryotic Cells / DESIGN SPACE / Dynamic System / Rate Equations / Biological Assay / Rule Based / Feed-Forward / Networked Systems / Prothrombin / Behavior / Gene regulation / Kinetics / Systems Biology / Fluorescence / Cell Signaling / System Biology / Stem Cell / Gene expression / Multidisciplinary / Signal Transduction / Chemical Kinetics / Protein-Protein Interaction / Complex System / Computer Simulation / Calibration / Embryonic Stem Cell / Cell Death / Stochastic Simulation / Cell Signalling / Time Delay / Quorum Sensing / Model Reduction / Genome / Phenotype / Gibbs sampling / Numerical Integration / Bayesian model / Bacillus subtilis / Renormalization Group / Biological Process / Exponential distribution / Quantitative Trait Loci / Genetic variation / Differential equation / Eukaryotic Cells / DESIGN SPACE / Dynamic System / Rate Equations / Biological Assay / Rule Based / Feed-Forward / Networked Systems / Prothrombin

Farm animal proteomics — A review

Systems Biology / Food / Life Sciences / Proteomics / Health / System Biology / Animal Production / Animal Husbandry / Humans / Animals / Meat / Milk / Cattle / NEC / Biological systems / Swine / SRM / Large Scale / iTRAQ / Food Products / Proteome / Biochemistry and cell biology / Data Gathering / Biological System / System Biology / Animal Production / Animal Husbandry / Humans / Animals / Meat / Milk / Cattle / NEC / Biological systems / Swine / SRM / Large Scale / iTRAQ / Food Products / Proteome / Biochemistry and cell biology / Data Gathering / Biological System

EXPERIMENTAL ENZYME DATA AS PRESENTED IN BRENDA-A DATABASE FOR METABOLIC RESEARCH, ENZYME TECHNOLOGY AND SYSTEMS BIOLOGY

System Biology / Search Engine / System Information / Enzyme / Controlled Vocabulary / Experimental Data / Information System / Experimental Data / Information System

Towards environmental systems biology of Shewanella

Microbiology / Carbon / Systems Biology / Medical Microbiology / Carbon Cycle / System Biology / Fuel Cell / Nature / Energy Metabolism / Signal Transduction / Glucose / Oxygen / Binding Energy / Microbial Fuel Cell / Organic Matter / Shewanella / System Biology / Fuel Cell / Nature / Energy Metabolism / Signal Transduction / Glucose / Oxygen / Binding Energy / Microbial Fuel Cell / Organic Matter / Shewanella

Semantic systems biology

Knowledge Management / Mathematical Modelling / Semantic Web / System Biology / Knowledge Representation / SEMANTIC WEB TECHNOLOGY / Data Integrity / Biological systems / Hypothesis Generation / Biological Data / SEMANTIC WEB TECHNOLOGY / Data Integrity / Biological systems / Hypothesis Generation / Biological Data

Systems perspectives on mRNA processing

Immunology / Genomics / Cancer / System Biology / Apoptosis / Functional Genomics / Animals / Cell / Cell Death / Post-Transcriptional Gene Regulation / Differentiation / Clinical Sciences / Protein Interaction / RNA-binding proteins / Protein Binding / Protein Biosynthesis / Biochemistry and cell biology / Cell Growth / Functional Genomics / Animals / Cell / Cell Death / Post-Transcriptional Gene Regulation / Differentiation / Clinical Sciences / Protein Interaction / RNA-binding proteins / Protein Binding / Protein Biosynthesis / Biochemistry and cell biology / Cell Growth

Cell design in bacteria as a convex optimization problem

Engineering / Optimal Control / Systems Biology / Modeling / Convex Optimization / Dynamic programming / Supervisory Control / Synchronization / System Biology / Multi Agent System / Optimization Problem / Controllability / Stochastic Control / Mathematical Sciences / Consensus / Gram Positive / Multi Agent Systems / Detectability / Automatica / Convex Analysis / Nonlinear / State Space / Space Time / Steady state / Sensorimotor synchronisation / Idempotent / Internal Model / Multiplier / Linear System / Actuator / Bacillus subtilis / Global stability / Dimensionality / Semigroup / Growth rate / Tropical / Muilti-region input-output model / Saturation / Differential equation / Duality / Boundary Condition / Discrete Time Systems / Linearity / Initial Condition / Non Linear Control / LINEAR PROGRAM / Pontryagin maximum principle / Curse of Dimensionality / Small Gain Theorem / Dynamic programming / Supervisory Control / Synchronization / System Biology / Multi Agent System / Optimization Problem / Controllability / Stochastic Control / Mathematical Sciences / Consensus / Gram Positive / Multi Agent Systems / Detectability / Automatica / Convex Analysis / Nonlinear / State Space / Space Time / Steady state / Sensorimotor synchronisation / Idempotent / Internal Model / Multiplier / Linear System / Actuator / Bacillus subtilis / Global stability / Dimensionality / Semigroup / Growth rate / Tropical / Muilti-region input-output model / Saturation / Differential equation / Duality / Boundary Condition / Discrete Time Systems / Linearity / Initial Condition / Non Linear Control / LINEAR PROGRAM / Pontryagin maximum principle / Curse of Dimensionality / Small Gain Theorem

Cell design in bacteria as a convex optimization problem

Engineering / Optimal Control / Systems Biology / Modeling / Convex Optimization / Dynamic programming / Supervisory Control / Synchronization / System Biology / Multi Agent System / Optimization Problem / Controllability / Stochastic Control / Mathematical Sciences / Consensus / Gram Positive / Multi Agent Systems / Detectability / Automatica / Convex Analysis / Nonlinear / State Space / Space Time / Steady state / Sensorimotor synchronisation / Idempotent / Internal Model / Multiplier / Linear System / Actuator / Bacillus subtilis / Global stability / Dimensionality / Semigroup / Growth rate / Tropical / Muilti-region input-output model / Saturation / Differential equation / Duality / Boundary Condition / Discrete Time Systems / Linearity / Initial Condition / Non Linear Control / LINEAR PROGRAM / Pontryagin maximum principle / Curse of Dimensionality / Small Gain Theorem / Dynamic programming / Supervisory Control / Synchronization / System Biology / Multi Agent System / Optimization Problem / Controllability / Stochastic Control / Mathematical Sciences / Consensus / Gram Positive / Multi Agent Systems / Detectability / Automatica / Convex Analysis / Nonlinear / State Space / Space Time / Steady state / Sensorimotor synchronisation / Idempotent / Internal Model / Multiplier / Linear System / Actuator / Bacillus subtilis / Global stability / Dimensionality / Semigroup / Growth rate / Tropical / Muilti-region input-output model / Saturation / Differential equation / Duality / Boundary Condition / Discrete Time Systems / Linearity / Initial Condition / Non Linear Control / LINEAR PROGRAM / Pontryagin maximum principle / Curse of Dimensionality / Small Gain Theorem

A systems-biology approach to modular genetic complexity

Genetics / Applied Mathematics / Systems Biology / Nonlinear dynamics / System Biology / Information Flow / Saccharomyces cerevisiae / Chaos / Cluster Analysis / Gene Regulatory Networks / Information and Network Security / Very high throughput / Numerical Analysis and Computational Mathematics / Large Scale / Molecular Interactions / Interaction Network / Information Flow / Saccharomyces cerevisiae / Chaos / Cluster Analysis / Gene Regulatory Networks / Information and Network Security / Very high throughput / Numerical Analysis and Computational Mathematics / Large Scale / Molecular Interactions / Interaction Network

EXPERIMENTAL ENZYME DATA AS PRESENTED IN BRENDA-A DATABASE FOR METABOLIC RESEARCH, ENZYME TECHNOLOGY AND SYSTEMS BIOLOGY

System Biology / Search Engine / System Information / Enzyme / Controlled Vocabulary / Experimental Data

Towards environmental systems biology of Shewanella

Microbiology / Carbon / Systems Biology / Medical Microbiology / Carbon Cycle / System Biology / Fuel Cell / Energy Metabolism / Signal Transduction / Glucose / Oxygen / Binding Energy / Microbial Fuel Cell / Organic Matter / Shewanella / System Biology / Fuel Cell / Energy Metabolism / Signal Transduction / Glucose / Oxygen / Binding Energy / Microbial Fuel Cell / Organic Matter / Shewanella

Integrating systems approaches into pharmaceutical sciences

Genomics / Systems Biology / Clinical Pharmacology / Drug development / System Biology / Pharmaceutical Chemistry / Modelling and simulation / Computer Simulation / Europe / Drug Industry / Pharmaceutical Chemistry / Modelling and simulation / Computer Simulation / Europe / Drug Industry
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